Specimen
Specimen view.
Columns
| Name | Type | Description |
| id | String | The logical id of the resource, as used in the URL for the resource. Once assigned, this value never changes. |
| lastUpdated | Datetime | The metadata about the resource. This is content that is maintained by the infrastructure. Changes to the content might not always be associated with version changes to the resource. |
| implicitRules | String | A reference to a set of rules that were followed when the resource was constructed, and which must be understood when processing the content. Often, this is a reference to an implementation guide that defines the special rules along with other profiles etc. |
| language | String | The base language in which the resource is written. |
| text_div | String | The div of the text. A human-readable narrative that contains a summary of the resource and can be used to represent the content of the resource to a human. The narrative need not encode all the structured data, but is required to contain sufficient detail to make it 'clinically safe' for a human to just read the narrative. Resource definitions may define what content should be represented in the narrative to ensure clinical safety. |
| text_status | String | The status of the text. A human-readable narrative that contains a summary of the resource and can be used to represent the content of the resource to a human. The narrative need not encode all the structured data, but is required to contain sufficient detail to make it 'clinically safe' for a human to just read the narrative. Resource definitions may define what content should be represented in the narrative to ensure clinical safety. |
| contained | String | These resources do not have an independent existence apart from the resource that contains them - they cannot be identified independently, and nor can they have their own independent transaction scope. |
| extension | String | May be used to represent additional information that is not part of the basic definition of the resource. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. |
| modifierExtension | String | May be used to represent additional information that is not part of the basic definition of the resource and that modifies the understanding of the element that contains it and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions. Modifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself). |
| identifier_value | String | The value of the identifier. Id for specimen. |
| identifier_use | String | The identifier-use of the identifier-use. Id for specimen. |
| identifier_type_coding | String | The coding of the identifier-type. Id for specimen. |
| identifier_type_text | String | The text of the identifier-type. Id for specimen. |
| identifier_system | String | The identifier-system of the identifier-system. Id for specimen. |
| identifier_period_start | String | The start of the identifier-period. Id for specimen. |
| identifier_period_end | String | The end of the identifier-period. Id for specimen. |
| accessionIdentifier_value | String | The value of the accessionIdentifier. The identifier assigned by the lab when accessioning specimen(s). This is not necessarily the same as the specimen identifier, depending on local lab procedures. |
| accessionIdentifier_use | String | The accessionIdentifier-use of the accessionIdentifier-use. The identifier assigned by the lab when accessioning specimen(s). This is not necessarily the same as the specimen identifier, depending on local lab procedures. |
| accessionIdentifier_type_coding | String | The coding of the accessionIdentifier-type. The identifier assigned by the lab when accessioning specimen(s). This is not necessarily the same as the specimen identifier, depending on local lab procedures. |
| accessionIdentifier_type_text | String | The text of the accessionIdentifier-type. The identifier assigned by the lab when accessioning specimen(s). This is not necessarily the same as the specimen identifier, depending on local lab procedures. |
| accessionIdentifier_system | String | The accessionIdentifier-system of the accessionIdentifier-system. The identifier assigned by the lab when accessioning specimen(s). This is not necessarily the same as the specimen identifier, depending on local lab procedures. |
| accessionIdentifier_period_start | Datetime | The start of the accessionIdentifier-period. The identifier assigned by the lab when accessioning specimen(s). This is not necessarily the same as the specimen identifier, depending on local lab procedures. |
| accessionIdentifier_period_end | Datetime | The end of the accessionIdentifier-period. The identifier assigned by the lab when accessioning specimen(s). This is not necessarily the same as the specimen identifier, depending on local lab procedures. |
| status | String | The availability of the specimen. |
| type_coding | String | The coding of the type. The kind of material that forms the specimen. |
| type_text | String | The text of the type. The kind of material that forms the specimen. |
| subject_display | String | The display of the subject. Where the specimen came from. This may be from patient(s), from a location (e.g., the source of an environmental sample), or a sampling of a substance or a device. |
| subject_reference | String | The reference of the subject. Where the specimen came from. This may be from patient(s), from a location (e.g., the source of an environmental sample), or a sampling of a substance or a device. |
| subject_identifier_value | String | The value of the subject-identifier. Where the specimen came from. This may be from patient(s), from a location (e.g., the source of an environmental sample), or a sampling of a substance or a device. |
| subject_type | String | The subject-type of the subject-type. Where the specimen came from. This may be from patient(s), from a location (e.g., the source of an environmental sample), or a sampling of a substance or a device. |
| receivedTime | Datetime | Time when specimen was received for processing or testing. |
| parent_display | String | The display of the parent. Reference to the parent (source) specimen which is used when the specimen was either derived from or a component of another specimen. |
| parent_reference | String | The reference of the parent. Reference to the parent (source) specimen which is used when the specimen was either derived from or a component of another specimen. |
| parent_identifier_value | String | The value of the parent-identifier. Reference to the parent (source) specimen which is used when the specimen was either derived from or a component of another specimen. |
| parent_type | String | The parent-type of the parent-type. Reference to the parent (source) specimen which is used when the specimen was either derived from or a component of another specimen. |
| request_display | String | The display of the request. Details concerning a service request that required a specimen to be collected. |
| request_reference | String | The reference of the request. Details concerning a service request that required a specimen to be collected. |
| request_identifier_value | String | The value of the request-identifier. Details concerning a service request that required a specimen to be collected. |
| request_type | String | The request-type of the request-type. Details concerning a service request that required a specimen to be collected. |
| collection_id | String | The collection-id of the collection-id. Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces. |
| collection_extension | String | The collection-extension of the collection-extension. May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. |
| collection_modifierExtension | String | The collection-modifierExtension of the collection-modifierExtension. May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions. Modifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself). |
| collection_collector_display | String | The display of the collection-collector. Person who collected the specimen. |
| collection_collector_reference | String | The reference of the collection-collector. Person who collected the specimen. |
| collection_collector_identifier_value | String | The value of the collection-collector-identifier. Person who collected the specimen. |
| collection_collector_type | String | The collection-collector-type of the collection-collector-type. Person who collected the specimen. |
| collection_collected_x_ | Datetime | The collection-collected[x] of the collection-collected[x]. Time when specimen was collected from subject - the physiologically relevant time. |
| collection_duration | String | The collection-duration of the collection-duration. The span of time over which the collection of a specimen occurred. |
| collection_quantity_value | Decimal | The value of the collection-quantity. The quantity of specimen collected; for instance the volume of a blood sample, or the physical measurement of an anatomic pathology sample. |
| collection_quantity_unit | String | The unit of the collection-quantity. The quantity of specimen collected; for instance the volume of a blood sample, or the physical measurement of an anatomic pathology sample. |
| collection_quantity_system | String | The system of the collection-quantity. The quantity of specimen collected; for instance the volume of a blood sample, or the physical measurement of an anatomic pathology sample. |
| collection_quantity_comparator | String | The collection-quantity-comparator of the collection-quantity-comparator. The quantity of specimen collected; for instance the volume of a blood sample, or the physical measurement of an anatomic pathology sample. |
| collection_quantity_code | String | The collection-quantity-code of the collection-quantity-code. The quantity of specimen collected; for instance the volume of a blood sample, or the physical measurement of an anatomic pathology sample. |
| collection_method_coding | String | The coding of the collection-method. A coded value specifying the technique that is used to perform the procedure. |
| collection_method_text | String | The text of the collection-method. A coded value specifying the technique that is used to perform the procedure. |
| collection_bodySite_coding | String | The coding of the collection-bodySite. Anatomical location from which the specimen was collected (if subject is a patient). This is the target site. This element is not used for environmental specimens. |
| collection_bodySite_text | String | The text of the collection-bodySite. Anatomical location from which the specimen was collected (if subject is a patient). This is the target site. This element is not used for environmental specimens. |
| collection_fastingStatus_x_coding | String | The coding of the collection-fastingStatus[x]. Abstinence or reduction from some or all food, drink, or both, for a period of time prior to sample collection. |
| collection_fastingStatus_x_text | String | The text of the collection-fastingStatus[x]. Abstinence or reduction from some or all food, drink, or both, for a period of time prior to sample collection. |
| processing_id | String | The processing-id of the processing-id. Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces. |
| processing_extension | String | The processing-extension of the processing-extension. May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. |
| processing_modifierExtension | String | The processing-modifierExtension of the processing-modifierExtension. May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions. Modifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself). |
| processing_description | String | The processing-description of the processing-description. Textual description of procedure. |
| processing_procedure_coding | String | The coding of the processing-procedure. A coded value specifying the procedure used to process the specimen. |
| processing_procedure_text | String | The text of the processing-procedure. A coded value specifying the procedure used to process the specimen. |
| processing_additive_display | String | The display of the processing-additive. Material used in the processing step. |
| processing_additive_reference | String | The reference of the processing-additive. Material used in the processing step. |
| processing_additive_identifier_value | String | The value of the processing-additive-identifier. Material used in the processing step. |
| processing_additive_type | String | The processing-additive-type of the processing-additive-type. Material used in the processing step. |
| processing_time_x_ | Datetime | The processing-time[x] of the processing-time[x]. A record of the time or period when the specimen processing occurred. For example the time of sample fixation or the period of time the sample was in formalin. |
| container_id | String | The container-id of the container-id. Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces. |
| container_extension | String | The container-extension of the container-extension. May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. |
| container_modifierExtension | String | The container-modifierExtension of the container-modifierExtension. May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions. Modifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself). |
| container_identifier_value | String | The value of the container-identifier. Id for container. There may be multiple; a manufacturer's bar code, lab assigned identifier, etc. The container ID may differ from the specimen id in some circumstances. |
| container_identifier_use | String | The container-identifier-use of the container-identifier-use. Id for container. There may be multiple; a manufacturer's bar code, lab assigned identifier, etc. The container ID may differ from the specimen id in some circumstances. |
| container_identifier_type_coding | String | The coding of the container-identifier-type. Id for container. There may be multiple; a manufacturer's bar code, lab assigned identifier, etc. The container ID may differ from the specimen id in some circumstances. |
| container_identifier_type_text | String | The text of the container-identifier-type. Id for container. There may be multiple; a manufacturer's bar code, lab assigned identifier, etc. The container ID may differ from the specimen id in some circumstances. |
| container_identifier_system | String | The container-identifier-system of the container-identifier-system. Id for container. There may be multiple; a manufacturer's bar code, lab assigned identifier, etc. The container ID may differ from the specimen id in some circumstances. |
| container_identifier_period_start | String | The start of the container-identifier-period. Id for container. There may be multiple; a manufacturer's bar code, lab assigned identifier, etc. The container ID may differ from the specimen id in some circumstances. |
| container_identifier_period_end | String | The end of the container-identifier-period. Id for container. There may be multiple; a manufacturer's bar code, lab assigned identifier, etc. The container ID may differ from the specimen id in some circumstances. |
| container_description | String | The container-description of the container-description. Textual description of the container. |
| container_type_coding | String | The coding of the container-type. The type of container associated with the specimen (e.g. slide, aliquot, etc.). |
| container_type_text | String | The text of the container-type. The type of container associated with the specimen (e.g. slide, aliquot, etc.). |
| container_capacity_value | Decimal | The value of the container-capacity. The capacity (volume or other measure) the container may contain. |
| container_capacity_unit | String | The unit of the container-capacity. The capacity (volume or other measure) the container may contain. |
| container_capacity_system | String | The system of the container-capacity. The capacity (volume or other measure) the container may contain. |
| container_capacity_comparator | String | The container-capacity-comparator of the container-capacity-comparator. The capacity (volume or other measure) the container may contain. |
| container_capacity_code | String | The container-capacity-code of the container-capacity-code. The capacity (volume or other measure) the container may contain. |
| container_specimenQuantity_value | Decimal | The value of the container-specimenQuantity. The quantity of specimen in the container; may be volume, dimensions, or other appropriate measurements, depending on the specimen type. |
| container_specimenQuantity_unit | String | The unit of the container-specimenQuantity. The quantity of specimen in the container; may be volume, dimensions, or other appropriate measurements, depending on the specimen type. |
| container_specimenQuantity_system | String | The system of the container-specimenQuantity. The quantity of specimen in the container; may be volume, dimensions, or other appropriate measurements, depending on the specimen type. |
| container_specimenQuantity_comparator | String | The container-specimenQuantity-comparator of the container-specimenQuantity-comparator. The quantity of specimen in the container; may be volume, dimensions, or other appropriate measurements, depending on the specimen type. |
| container_specimenQuantity_code | String | The container-specimenQuantity-code of the container-specimenQuantity-code. The quantity of specimen in the container; may be volume, dimensions, or other appropriate measurements, depending on the specimen type. |
| container_additive_x_coding | String | The coding of the container-additive[x]. Introduced substance to preserve, maintain or enhance the specimen. Examples: Formalin, Citrate, EDTA. |
| container_additive_x_text | String | The text of the container-additive[x]. Introduced substance to preserve, maintain or enhance the specimen. Examples: Formalin, Citrate, EDTA. |
| condition_coding | String | The coding of the condition. A mode or state of being that describes the nature of the specimen. |
| condition_text | String | The text of the condition. A mode or state of being that describes the nature of the specimen. |
| note | String | To communicate any details or issues about the specimen or during the specimen collection. (for example: broken vial, sent with patient, frozen). |
| SP_source | String | The SP_source search parameter. |
| SP_text | String | The SP_text search parameter. |
| SP_content | String | The SP_content search parameter. |
| SP_securitySP_start | String | The SP_securitySP_start search parameter. |
| SP_container_end | String | The SP_container_end search parameter. |
| SP_tagSP_start | String | The SP_tagSP_start search parameter. |
| SP_subject | String | The SP_subject search parameter. |
| SP_bodysite_end | String | The SP_bodysite_end search parameter. |
| SP_collected | String | The SP_collected search parameter. |
| SP_identifier_start | String | The SP_identifier_start search parameter. |
| SP_type_start | String | The SP_type_start search parameter. |
| SP_parent | String | The SP_parent search parameter. |
| SP_collector | String | The SP_collector search parameter. |
| SP_list | String | The SP_list search parameter. |
| SP_accession_start | String | The SP_accession_start search parameter. |
| SP_type_end | String | The SP_type_end search parameter. |
| SP_identifier_end | String | The SP_identifier_end search parameter. |
| SP_profile | String | The SP_profile search parameter. |
| SP_tagSP_end | String | The SP_tagSP_end search parameter. |
| SP_patient | String | The SP_patient search parameter. |
| SP_securitySP_end | String | The SP_securitySP_end search parameter. |
| SP_filter | String | The SP_filter search parameter. |
| SP_container_start | String | The SP_container_start search parameter. |
| SP_accession_end | String | The SP_accession_end search parameter. |
| SP_bodysite_start | String | The SP_bodysite_start search parameter. |